Clinx GenoSens Gel documentation and analysis system      FAQs

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FAQ 1: How can I use it to analysis protein gels and western blotting membranes,etc?
FAQ 2: how to increase the ratio of signal to noise ?
FAQ 3:There are a number of cameras with different specialist applications. Which type should be used for a particular application?
FAQ 4: My images are very dark. How can I improve them?
FAQ 5: What is saturation and how do I avoid it?
FAQ 6: Clinx GenoSens system has a motorized zoom lens. What is the significance of this?
FAQ 7: I do chemiluminescence work. I cannot see my samples by eye so I need long exposures. How long an exposure can I set and how do I cope with the noise build-up on the image?
FAQ 8: Can I use my images for publication?
FAQ 9: Which types of printers can I use to print my images?
FAQ 10: Can the software analyze color images taken from scanners?
FAQ 11: Which operating systems can I use with my Clinx GenoSens systems?

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FAQ 1:How can I use it to analysis protein gels and western blotting membranes,etc?          You should choose Trans-White while detecting protein gels. When samples are opaque(such as western blotting membrane), the White reflection light will be chose to illuminate the top surface of the sample and reflected light enables the camera to detect the gel.
                                                                                                                                           
FAQ 2: How to increase the ratio of signal to noise ?
The longer the exposure time used to capture an image, the more background noise builds up in the system. This noise will often be visible on the captured image. Cameras used for weak signals applications should be cooled. Cooling drastically reduces inherent background noise. Some types of The Clinx GenoSens gel documentation and analysis system are equipped with cooled CCD. The best results are therefore obtained by having the lowest signal to noise ratio possible.

                                                                                                   
      
FAQ 3:There are a number of cameras with different specialist applications. Which type   should be used for a particular application?
When you are looking for an imaging system you should consider all the applications you are using. Protein gels, DNA & RNA gels, colony counting, spot blots, ELISA plates and other images that require short exposure times, can all be done using a standard CCD camera system.
For chemiluminescence, spot blots or antibody assays which require much longer exposure times, a cooled CCD camera system should be selected.Please bear in mind that at a later date your research interests may change, resulting in a requirement to upgrade your system. Always ensure that you can upgrade your system with minimal cost.
                                                                                                                                           
FAQ 4:My images are very dark. How can I improve them?
Firstly, check that the aperture on your lens is fully open. In addition, all Clinx GenoSens CCD cameras have the ability to integrate (extend the exposure time), thus improving the brightness of the image. Using the integration control, increase the camera exposure - this will make the image brighter. This is especially relevant to faint bands on DNA gels. To get the correct aperture/integration simply and quickly whilst avoiding over exposure, use the Auto-Exposure function. The software then captures the correct integration time for the set aperture as well as assessing the saturation of the image during the process.
                                                                                                                                           
FAQ 5:What is saturation and how do I avoid it?
Saturation occurs when an image is over exposed. This means that the part or all of the image exceeds the dynamic range of the camera. Once parts of an image are saturated they are unsuitable for quantification as it is impossible to measure genuine differences in intensity. To avoid these, you may manually decrease the exposure time until the saturation disappear. Another method is to use the Auto-Exposure function. The software increases the exposure time until saturation is reached on part of the image. It then takes off one frame (1/30 of a second) from this time and captures, thus giving the brightest image possible without saturation.
                                                                                                                                           
FAQ 6:Clinx GenoSens system has a motorized zoom lens. What is the significance of this?
Clinx GenoSens selected the motorized zoom lens so that the user would not need to touch the camera lens assembly. Using a manual zoom lens means that the user can easily contaminate the camera/lens with some very nasty chemicals. Some chemicals crystallize upon drying and potentially prevent free movement of parts. Having a motorized lens prevents this from happening.
Clinx GenoSens selected the motorized zoom lens so that the user would not need to touch the camera lens assembly. Using a manual zoom lens means that the user can easily contaminate the camera/lens with some very nasty chemicals. Especially carcinogenic EB, some other chemicals crystallize upon drying and potentially prevent free movement of parts. Having a motorized lens prevents this from happening.
                                                                                                                                         
FAQ 7:I do chemiluminescence work. I cannot see my samples by eye so I need long exposures. How long an exposure can I set and how do I cope with the noise build-up on the image?
Most chemiluminescent exposure times will depend on the strength of the secondary antibody and the substrate used. Some chemiluminescent substrates work more effectively with CCD cameras than others, those that are poor may be improved by adjusting the secondary antibody. Exposure times vary from around 30 seconds to 8 -10 minutes. On average you should be looking at 1-2 minutes. Some types of Clinx GenoSens gel documentation and analysis system are equipped with cooled CCD camera, which results in a reduction of noise to almost undetectable levels.
                                                                                                                                          
FAQ 8:Can I use my images for publication?
Yes, the images can be used for all the leading journals. Images in TIFF file format are usually used.
                                                                                                                                          
FAQ 9:Which types of printers can I use to print my images?
Any printer can be used so long as it has Windows drivers. The most common are thermal, dye sublimation, inkjet or laser printers.
                                                                                                                                          
FAQ 10:Can the software analyze color images taken from scanners?
The software can analyze images up to 24 bit color.
                                                                                                                                         
FAQ 11:Which operating systems can I use with my Clinx GenoSens systems?
Clinx GenoSens systems and their PC Windows operating system requirements: Windows 2000/me/NT/XP,etc.

                                                                                                                                          

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